Sample Submission - Geoduck Tissue & gDNA for Illumina Pilot Sequencing Project

2016
Geoduck Genome Sequencing
Samples Submitted
geoduck
Illumina
Panopea generosa
Author

Sam White

Published

December 21, 2016

Sent the following samples to Illumina for possible selection in a new pilot sequencing platform they’re working on.

The 12 samples will be used for RNAseq for genome annotation - numbers indicate desired sequencing priority.

Juvenile and larval samples were from Hollie Putnam (see links below for more info).

Other tissue was from a single, adult geoduck, collected by Brent & Steven on 20150811.

  1. Gonad

  2. Heart

  3. Ctenidia

  4. Juvenile OA exposure (super low)  (EPI_115, EPI_116)

  5. Juvenile ambient exposure (ambient treatment) (EPI_123, EPI_124)

  6. Larvae day 0 (EPI_74, EPI_75)

  7. Larvae day 5 (EPI_99)

  8. Crystalline style

  9. Byssus gland

  10. Mantle

  11. Labial palps

  12. Juvenile OA exposure - low treatment (EPI_107, EPI_108)

In addition to the above 12 samples, ~1.5μg of geoduck gDNA (isolated this morning) was sent.