We received the data from our whole genome bisulfite sequencing (WGBS) submission to ZymoResearch on 2020820 for Ronit’s C.gigas diploid/triploid dessication/heat stress project.
Samples were sequenced using 150bp paired-end, on the Illumina NovaSeq.
Files have been added to the C.gigas folder in nightingales on Owl (Synology server).
I’ve updated the nightingales Google Sheet database as well.
Next up:
Run FatQC
Submit to NCBI sequence read archive (SRA).
| SeqID | Library_Name | Tissue | Ploidy | Dessication | Heat_Stress |
|---|---|---|---|---|---|
| zr3534_1 | D11-C | ctenidia | diploid | yes | no |
| zr3534_2 | D12-C | ctenidia | diploid | yes | no |
| zr3534_3 | D13-C | ctenidia | diploid | yes | no |
| zr3534_4 | D19-C | ctenidia | diploid | yes | yes |
| zr3534_5 | D20-C | ctenidia | diploid | yes | yes |
| zr3534_6 | T11-C | ctenidia | triploid | yes | no |
| zr3534_7 | T12-C | ctenidia | triploid | yes | no |
| zr3534_8 | T13-C | ctenidia | triploid | yes | no |
| zr3534_9 | T19-C | ctenidia | triploid | yes | yes |
| zr3534_10 | T20-C | ctenidia | triploid | yes | yes |