SRA Submission - CEABIGR WGBS and RNA-seq

Finally got around to getting the CEABIGR (GitHub repo) sequencing data uploaded to NCBI’s Short Read Archive (SRA). Data transfer took quite awhile, as we have both whole genome bisulfite (WGBS) and RNA-seq data for this project. Once that was completed, I filled out the required metadata and completed the submission.

The data is now available in the SRA, under BioProject PRJNA1089235. Will get accessions added to Nightingales (Google Sheet).

accession	study	bioproject_accession	biosample_accession	sample_name	library_strategy
SRR28381318	SRP496238	PRJNA1089235	SAMN40533904	3F	Bisulfite-Seq
SRR28381317	SRP496238	PRJNA1089235	SAMN40533905	6M	Bisulfite-Seq
SRR28381306	SRP496238	PRJNA1089235	SAMN40533906	7M	Bisulfite-Seq
SRR28381295	SRP496238	PRJNA1089235	SAMN40533907	9M	Bisulfite-Seq
SRR28381284	SRP496238	PRJNA1089235	SAMN40533908	12M	Bisulfite-Seq
SRR28381273	SRP496238	PRJNA1089235	SAMN40533909	13M	Bisulfite-Seq
SRR28381270	SRP496238	PRJNA1089235	SAMN40533910	16F	Bisulfite-Seq
SRR28381269	SRP496238	PRJNA1089235	SAMN40533911	19F	Bisulfite-Seq
SRR28381268	SRP496238	PRJNA1089235	SAMN40533912	22F	Bisulfite-Seq
SRR28381267	SRP496238	PRJNA1089235	SAMN40533913	23M	Bisulfite-Seq
SRR28381316	SRP496238	PRJNA1089235	SAMN40533914	29F	Bisulfite-Seq
SRR28381315	SRP496238	PRJNA1089235	SAMN40533915	31M	Bisulfite-Seq
SRR28381314	SRP496238	PRJNA1089235	SAMN40533916	35F	Bisulfite-Seq
SRR28381313	SRP496238	PRJNA1089235	SAMN40533917	36F	Bisulfite-Seq
SRR28381312	SRP496238	PRJNA1089235	SAMN40533918	39F	Bisulfite-Seq
SRR28381311	SRP496238	PRJNA1089235	SAMN40533919	41F	Bisulfite-Seq
SRR28381310	SRP496238	PRJNA1089235	SAMN40533920	44F	Bisulfite-Seq
SRR28381309	SRP496238	PRJNA1089235	SAMN40533921	48M	Bisulfite-Seq
SRR28381308	SRP496238	PRJNA1089235	SAMN40533922	50F	Bisulfite-Seq
SRR28381307	SRP496238	PRJNA1089235	SAMN40533923	52F	Bisulfite-Seq
SRR28381305	SRP496238	PRJNA1089235	SAMN40533924	53F	Bisulfite-Seq
SRR28381304	SRP496238	PRJNA1089235	SAMN40533925	54F	Bisulfite-Seq
SRR28381303	SRP496238	PRJNA1089235	SAMN40533926	59M	Bisulfite-Seq
SRR28381302	SRP496238	PRJNA1089235	SAMN40533927	64M	Bisulfite-Seq
SRR28381301	SRP496238	PRJNA1089235	SAMN40533928	76F	Bisulfite-Seq
SRR28381300	SRP496238	PRJNA1089235	SAMN40533929	77F	Bisulfite-Seq
SRR28381299	SRP496238	PRJNA1089235	SAMN40533930	S3F	RNA-Seq
SRR28381298	SRP496238	PRJNA1089235	SAMN40533931	S6M	RNA-Seq
SRR28381297	SRP496238	PRJNA1089235	SAMN40533932	S7M	RNA-Seq
SRR28381296	SRP496238	PRJNA1089235	SAMN40533933	S9M	RNA-Seq
SRR28381294	SRP496238	PRJNA1089235	SAMN40533934	S12M	RNA-Seq
SRR28381293	SRP496238	PRJNA1089235	SAMN40533935	S13M	RNA-Seq
SRR28381292	SRP496238	PRJNA1089235	SAMN40533936	S16F	RNA-Seq
SRR28381291	SRP496238	PRJNA1089235	SAMN40533937	S19F	RNA-Seq
SRR28381290	SRP496238	PRJNA1089235	SAMN40533938	S22F	RNA-Seq
SRR28381289	SRP496238	PRJNA1089235	SAMN40533939	S23M	RNA-Seq
SRR28381288	SRP496238	PRJNA1089235	SAMN40533940	S29F	RNA-Seq
SRR28381287	SRP496238	PRJNA1089235	SAMN40533941	S31M	RNA-Seq
SRR28381286	SRP496238	PRJNA1089235	SAMN40533942	S35F	RNA-Seq
SRR28381285	SRP496238	PRJNA1089235	SAMN40533943	S36F	RNA-Seq
SRR28381283	SRP496238	PRJNA1089235	SAMN40533944	S39F	RNA-Seq
SRR28381282	SRP496238	PRJNA1089235	SAMN40533945	S41F	RNA-Seq
SRR28381281	SRP496238	PRJNA1089235	SAMN40533946	S44F	RNA-Seq
SRR28381280	SRP496238	PRJNA1089235	SAMN40533947	S48M	RNA-Seq
SRR28381279	SRP496238	PRJNA1089235	SAMN40533948	S50F	RNA-Seq
SRR28381278	SRP496238	PRJNA1089235	SAMN40533949	S52F	RNA-Seq
SRR28381277	SRP496238	PRJNA1089235	SAMN40533950	S53F	RNA-Seq
SRR28381276	SRP496238	PRJNA1089235	SAMN40533951	S54F	RNA-Seq
SRR28381275	SRP496238	PRJNA1089235	SAMN40533952	S59M	RNA-Seq
SRR28381274	SRP496238	PRJNA1089235	SAMN40533953	S64M	RNA-Seq
SRR28381272	SRP496238	PRJNA1089235	SAMN40533954	S76F	RNA-Seq
SRR28381271	SRP496238	PRJNA1089235	SAMN40533955	S77F	RNA-Seq