Data Analysis - PyRad Analysis of Olympia Oyster GBS Data

2016
Genotype-by-sequencing at BGI
docker
EC2
jupyter notebook
olympia oyster
Ostrea lurida
pyrad
Author

Sam White

Published

July 27, 2016

Previously, I ran a PyRad analysis on just a subset of these samples in an attempt to have some data for a grant pre-proposal.

I’ve now completed a PyRad analysis on the full set. Now, I just need to figure out what to do with the output from this…

Jupyter Notebook: 20160715_ec2_oly_gbs_pyrad.ipynb