ENA Submission - Ostrea lurida draft genome Olurida_v081.fa

2020
Olympia Oyster Genome Sequencing
Author

Sam White

Published

July 8, 2020

Submitted our Ostrea lurida v081 genome assembly FastA to the European Nucloetide Archive.

Used the following manifest file:

STUDY   PRJEB39287
SAMPLE   ERS4809621
ASSEMBLYNAME   v081
ASSEMBLY_TYPE   isolate
COVERAGE   10
PROGRAM   SOAPdenovo2, PBjelly
PLATFORM   Illumina HiSeq, PacBio
MOLECULETYPE   genomic DNA
FASTA   Olurida_v081.fa.gz

I wasn’t entirely sure how much coverage we had, so I entered 10x as a value, since it’s a requirement for submission. Additionally, you can only supply a single SAMPLE, despite the fact that our sequencing efforts were derived from two tissues from the same animal.

Links to the STUDY and SAMPLE used for submission:

Study: PRJEB39287

Sample: SAMEA7048989

Link to the assembly accession: