Yaamini received her sequencing data from ZymoResearch; both whole genome bisfulfite sequencing (WGBS) and RNAseq. I was tasked with downloading the data and running QC.
FastQ files were downloaded to Owl (https://owl.fish.washington.edu/nightingales/C_virginica/) and MD5 checksums were verified (not shown).
See this GitHub repo for full set of metadata associated with these files.
Next up, I’ll run FastQC, as well as get our nightingales spreadsheet updated.